Source code for message_ix_models.tools.wb

"""Tools for World Bank data."""

import logging
from collections import defaultdict
from collections.abc import MutableMapping
from functools import lru_cache
from typing import TYPE_CHECKING, Optional

import pandas as pd

if TYPE_CHECKING:
    import sdmx.model.common

log = logging.getLogger(__name__)


# FIXME Reduce complexity from 12 → ≤11
[docs]def assign_income_groups( # noqa: C901 cl_node: "sdmx.model.common.Codelist", cl_income_group: "sdmx.model.common.Codelist", method: str = "population", replace: Optional[dict[str, str]] = None, ) -> None: """Annotate `cl_node` with income groups. Each node is assigned an :class:`.Annotation` with :py:`id="wb-income-group"`, according to the income groups of its children (countries), as reflected in `cl_income_group` (see :func:`.get_income_group_codelist`). Parameters ---------- method : "population" or "count" Method for aggregation: - :py:`"population"` (default): the WB World Development Indicators (WDI) 2020 population for each country is used as a weight, so that the node's income group is the income group of the plurality of the population of its children. - :py:`"count"`: each country is weighted equally, so that the node's income group is the mode (most frequently occurring value) of its childrens'. replace : dict Mapping from wb-income-group annotation text appearing in `cl_income_group` to texts to be attached to `cl_node`. Mapping two keys to the same value effectively combines or aggregates those groups. See :func:`.make_map`. Example ------- Annotate the R12 node list with income group information, mapping high income countries (HIC) and upper-middle income countries (UMC) into one group and aggregating by population. >>> cl_node = get_codelist(f"node/R12") >>> cl_ig = get_income_group_codelist() >>> replace = make_map({"HIC": "HMIC", "UMC": "HMIC"}) >>> assign_income_groups(cl_node, cl_ig, replace=replace) >>> cl_node["R12_NAM"].get_annotation(id="wb-income-group").text HMIC """ import sdmx import sdmx.model.v21 as m replace = replace or dict() if method == "count": def get_weight(code: "sdmx.model.common.Code") -> float: """Weight of the country `code` in aggregation.""" return 1.0 elif method == "population": # Work around khaeru/sdmx#191: ensure the HTTPS URL is used client = sdmx.Client("WB_WDI") client.source.url = client.source.url.replace("http://", "https://") # Retrieve WB_WDI data for SERIES=SP_POP_TOTAL (Population, total) dm = client.data( "WDI", key="A.SP_POP_TOTL.", params=dict(startPeriod=2020, endPeriod=2020) ) # Convert to pd.Series with multi-index with levels: REF_AREA, SERIES, FREQ, # TIME_PERIOD. Because of the query, there is only 1 value for each unique # REF_AREA. df = sdmx.to_pandas(dm.data[0]) def get_weight(code: "sdmx.model.common.Code") -> float: """Return a weight for the country `code`: its total population.""" try: return df[code.id].item() except KeyError: # log.debug(f"No population data for {code!r}; omitted") return 0 else: # pragma: no cover raise ValueError(f"method={method!r}") weight_info = {} # For debugging # Iterate over nodes for node in cl_node: if not len(node.child): continue # Country → skip # Total weight of different income groups among `node`'s countries weight: MutableMapping[Optional[str], float] = defaultdict(lambda: 0.0) # Iterate over countries for country in node.child: # Identify the income group of `country` from an annotation try: ig = str( cl_income_group[country.id] .get_annotation(id="wb-income-group") .text ) # Apply replacement to `ig` ig = replace.get(ig, ig) except KeyError: # country.id is not in cl_income_group, or no such annotation ig = None weight[ig] += get_weight(country) if {None} == set(weight): continue # World node → no direct children that are countries # Sort weights and group IDs from largest/first alphabetically to smallest/last weight_sorted = sorted([(-v, k) for k, v in weight.items()]) weight_info[node.id] = pd.Series({k: -v for v, k in weight_sorted}) # Identify the income group with the largest weight; not None _, ig = next(filter(lambda item: item[1] is not None, weight_sorted)) try: # Remove any existing annotation node.pop_annotation(id="wb-income-group") except KeyError: pass # Annotate the node node.annotations.append(m.Annotation(id="wb-income-group", text=ig)) log.debug( "(node, group) weights:\n" + pd.concat(weight_info, axis=1).fillna(0).to_string() )
[docs]def fetch_codelist(id: str) -> "sdmx.model.common.Codelist": """Retrieve code lists related to the WB World Development Indicators. In principle this could be done with :py:`sdmx.Client("WB_WDI").codelist(id)`, but the World Bank SDMX REST API does not support queries for a specific code list. See https://datahelpdesk.worldbank.org/knowledgebase/articles/1886701-sdmx-api-queries. :func:`fetch_codelist` retrieves http://api.worldbank.org/v2/sdmx/rest/codelist/WB/, the structure message containing *all* code lists; and extracts and returns the one with the given `id`. """ import pooch import sdmx file = pooch.retrieve( url="https://api.worldbank.org/v2/sdmx/rest/codelist/WB/", known_hash=None ) # Read the retrieved SDMX StructureMessage and extract the code list sm = sdmx.read_sdmx(file) return sm.codelist[id]
[docs]@lru_cache() def get_income_group_codelist() -> "sdmx.model.common.Codelist": """Return a :class:`.Codelist` with World Bank income group information. The returned code list is a modified version of the one with URN ``…Codelist=WB:CL_REF_AREA_WDI(1.0)``, via :func:`.fetch_codelist`. This is augmented with information about the income group and lending category concepts as described at https://datahelpdesk.worldbank.org/knowledgebase/articles/906519 The information is stored two ways: - Existing codes in the list like "HIC: High income" that designate groups of countries are associated with child codes that are designated as members of that country. These can be accessed at :attr:`Code.child <sdmx.model.common.Item.child>`. - Existing codes in the list like "ABW: Aruba" are annotated with: - :py:`id="wb-income-group"`: the URN of the income group code, for instance "urn:sdmx:org.sdmx.infomodel.codelist.Code=WB:CL_REF_AREA_WDI(1.0).HIC". This is an unambiguous reference to a code in the same list. - :py:`id="wb-lending-category"`: the name of the lending category, if any. These can be accessed using :attr:`Code.annotations <sdmx.model.common.AnnotableArtefact.annotations>`, :attr:`Code.get_annotation <sdmx.model.common.AnnotableArtefact.get_annotation>`, and other methods. """ import pooch import sdmx.model.v21 as m cl = fetch_codelist("CL_REF_AREA_WDI") @lru_cache() def urn_for(name: str) -> str: """Return the URN of a code in `cl`, given its `name`.""" for code in cl: if str(code.name) == name: return code.urn raise ValueError(name) # pragma: no cover # Fetch the file containing the classification file = pooch.retrieve( url="https://datacatalogfiles.worldbank.org/ddh-published/0037712/DR0090755/" "CLASS.xlsx", known_hash="sha256:" "1418a4fd6badb7c26ae2bc3a9bfef4903f3d9c54c1679f856e1dece3c729e935", ) # Open the retrieved file ef = pd.ExcelFile(file) # Read the "List of economies" sheet → store wb-{income-group,lending-category} tmp = ( pd.read_excel(ef, sheet_name="List of economies") .drop(["Economy", "Region"], axis=1) .dropna(subset=["Income group"], axis=0) .set_index("Code") ) for code in cl: try: row = tmp.loc[code.id, :] except KeyError: # log.debug(f"Not in 'List of economies' sheet: {code!r}") continue # Annotate wb-income-group; map a value like "Low income" to a URN code.annotations.append( m.Annotation(id="wb-income-group", text=urn_for(row["Income group"])) ) try: code.annotations.append( m.Annotation(id="wb-lending-category", text=row["Lending category"]) ) except ValueError: pass # text was None → no value # Read the "Groups" sheet → assign hierarchy for group_id, group_df in ( pd.read_excel(ef, sheet_name="Groups") .drop(["GroupName", "CountryName", "Unnamed: 4"], axis=1) .groupby("GroupCode") ): try: # Identify the Code for this group ID group = cl[group_id] except KeyError: # log.debug(f"Group {group_id!r} is not in {cl}") continue for child_id in sorted(group_df["CountryCode"]): try: group.append_child(cl[child_id]) except KeyError: # log.debug(f"No code for child {child_id!r}") continue # log.debug(f"{cl[group_id]}: {len(cl[group_id].child)} children") # Read "Notes" sheet → append to description of `cl` tmp = "\n\n".join(pd.read_excel(ef, sheet_name="Notes").dropna()["Notes"]) # Ensure the "en" localization exists cl.description.localizations.setdefault("en", "") cl.description.localizations["en"] += ( "\n\nThis code list has been modified from the official version by the " "'message-ix-models' Python package to add annotations and hierarchy parsed " "from the World Bank income groups and lending categories as described at " "https://datahelpdesk.worldbank.org/knowledgebase/articles/906519. The original" f" Excel file parsed includes the following descriptive text:\n\n{tmp}" ) return cl
[docs]def make_map( source: dict[str, str], expand_key_urn: bool = True, expand_value_urn: bool = False ) -> dict[str, str]: """Prepare the :py:`replace` parameter of :func:`assign_income_groups`. The result has one (`key`, `value`) for each in `source`. Parameters ---------- expand_key_urn : bool If :obj:`True` (the default), replace each `key` from `source` with the URN for the code in ``CL_REF_AREA_WDI`` with :py:`id=key`. expand_value_urn : bool If :obj:`True`, replace each `value` from `source` with the URN for the code in ``CL_REF_AREA_WDI`` with :py:`id=value`. """ # Retrieve the code list cl = fetch_codelist("CL_REF_AREA_WDI") result = dict() for key, value in source.items(): key = cl[key].urn if expand_key_urn else key value = cl[value].urn if expand_value_urn else value result[key] = value return result